| 4 | Darwin Middle School (Public) | The Gardens | 539 |
| 9 | Dripstone Middle School (Public) | Tiwi | 519 |
| 12 | Katherine School Of The Air (Public) | Katherine | 507 |
| 13 | Nhulunbuy High School (Public) | Nhulunbuy | 501 |
| 16 | Nightcliff Middle School (Public) | Rapid Creek | 491 |
| 17 | Taminmin College (Public) | Humpty Doo | 485 |
| 19 | Sanderson Middle School (Public) | Malak | 475 |
| 20 | Batchelor Area School (Public) | Batchelor | 452 |
| 21 | Centralian Middle School (Public) | Alice Springs | 446 |
| 22 | Canteen Creek School (Public) | Canteen Creek | 428 |
| 23 | Jabiru Area School (Public) | Jabiru | 425 |
| 24 | Woolianna School (Public) | Daly River | 423 |
| 25 | Timber Creek School (Public) | Timber Creek | 398 |
| 26 | Tennant Creek High School (Public) | Tennant Creek | 369 |
| 27 | Wugularr School (Public) | Beswick | 364 |
| 29 | Ngukurr School (Public) | Ngukurr | 354 |
| 31 | Maningrida School (Public) | Maningrida | 332 |
| 32 | Gapuwiyak School (Public) | Gapuwiyak | 329 |
| 34 | Angurugu School (Public) | Angurugu | 320 |
| 35 | Umbakumba School (Public) | Umbakumba | 319 |
| 35 | Shepherdson College (Public) | Galiwinku | 319 |
| 38 | Milingimbi School (Public) | Milingimbi | 301 |
| 39 | Papunya School (Public) | Papunya | 288 |
| 40 | Yirrkala School (Public) | Yirrkala | 279 |
| 41 | Yirrkala Homeland School (Public) | Yirrkala | 254 |
